CSS5-IRD : GUYOT, Romain / Structure and Evolutionary History of Tropical Plant Genomes

Structure and Evolutionary History of Tropical Plant Genomes
Safeguard, analysis and promotion of wild plant diversity in developing countries

Competencies of GUYOT, Romain , senior scientist
UMR DIADE plant DIversity Adaptation and DEvelopment

/ African rice / Andes / biodiversity / bioinformatics / Biology (computational) / Brazil / coffee tree (Coffea) / Colombia / comparative approach / computer science / data (genetics) / data analysis / data infrastructure / data processing / DNA sequencing / dynamical system / Ecuador / epigenomics / evolution / Evolutionary history (plants) / genetics / genome diversification / genome sequencing / genomics / genomics (evolutive) / genomics (functional) / genomics (structural) / Ghana / integrative approach / Ivory Coast / Madagascar / Molecular Biology / multi-scale (functional) / MULTIDISCIPLINARY / NGS (Next Generation Sequencing) / pan-genomics / phylogeny / Phytophtora (plant fungus) / plant biology / plant variety improvement / research infrastructure / retrotransposon / rice / Rubiaceae (Coffea) / Sci. administration and management / SDG 02 (Sust. Devel. Goal - Alimentation) / SDG 04 (Sust. Devel. Goal - Education) / software engineering / South America / South-East Asia / training (fr: formation) / UMR Diade (plant DIversity Adapt. & DEv.) /

Competencies in black are unique of R. Guyot 's profile in the current state of the database

- Data portal DataSud: EVOGEC (Evolution of Coffee trees Genomes) team media and data sets
- GitHub: containing in particular :
                     * Inpactor, Integrated and Parallel Analyzer and Classifier of LTR Retrotransposons
                     * TIP_finder: An HPC Software to Detect Transposable Element Insertion Polymorphisms in Large Genomic Datasets
- data portal WildCofDB : Wild Coffea species database
- web-link Bio Inca  : interdisciplinary research laboratory on biodiversity and sustainable agriculture in the tropical Andes.